Cell Locator
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Contents
Getting Started
Application Overview
Reference Atlases
Coordinate Systems
LIMS Integration
Command Line Tools
Developer Guide
Acknowledgments
License
Cell Locator
Index
Edit on GitHub
Index
Symbols
|
A
|
C
|
D
|
F
|
I
|
M
|
N
|
O
|
P
|
R
|
S
|
T
|
V
Symbols
--annotation-file
command line option
--atlas
cl-export command line option
--atlas-type
command line option
--help
cl-convert command line option
cl-convert-convert command line option
cl-convert-infer command line option
cl-convert-versions command line option
cl-export command line option
--labelmap
cl-export command line option
--lims-base-url
command line option
--lims-specimen-id
command line option
--lims-specimen-kind
command line option
--model
cl-export command line option
--no-indent
cl-convert-convert command line option
--pir
cl-export command line option
--reference-view
command line option
--target
cl-convert-convert command line option
--version
cl-convert-convert command line option
--view-angle
command line option
-a
cl-export command line option
-h
cl-convert command line option
cl-convert-convert command line option
cl-convert-infer command line option
cl-convert-versions command line option
cl-export command line option
-l
cl-export command line option
-m
cl-export command line option
-t
cl-convert-convert command line option
-v
cl-convert-convert command line option
A
annotation
cl-export command line option
Annotation (class in cl_convert.model)
C
camera_position (cl_convert.model.Document attribute)
camera_view_up (cl_convert.model.Document attribute)
cl-convert command line option
--help
-h
cl-convert-convert command line option
--help
--no-indent
--target
--version
-h
-t
-v
dst
src
cl-convert-infer command line option
--help
-h
src
cl-convert-versions command line option
--help
-h
target
cl-export command line option
--atlas
--help
--labelmap
--model
--pir
-a
-h
-l
-m
annotation
cl_convert.converters
module
command line option
--annotation-file
--atlas-type
--lims-base-url
--lims-specimen-id
--lims-specimen-kind
--reference-view
--view-angle
Converter (class in cl_convert.model)
coordinate_system (cl_convert.model.Annotation attribute)
coordinate_units (cl_convert.model.Annotation attribute)
current_id (cl_convert.model.Document attribute)
D
Document (class in cl_convert.model)
dst
cl-convert-convert command line option
F
find_latest() (in module cl_convert.converters)
I
infer_normalize() (in module cl_convert.converters)
M
match() (in module cl_convert.converters)
module
cl_convert.converters
N
normalize() (cl_convert.model.Converter class method)
O
ontology (cl_convert.model.Document attribute)
orientation (cl_convert.model.Annotation attribute)
P
points (cl_convert.model.Annotation attribute)
R
reference_view (cl_convert.model.Document attribute)
representation_type (cl_convert.model.Annotation attribute)
S
specialize() (cl_convert.model.Converter class method)
src
cl-convert-convert command line option
cl-convert-infer command line option
stepSize (cl_convert.model.Document attribute)
T
target
cl-convert-versions command line option
thickness (cl_convert.model.Annotation attribute)
V
versioned() (in module cl_convert.model)
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